Dissertation Project Plan

1. DNA Experiments

1.1. Shotgun DNA Mapping

1.1.1. Software

1.1.1.1. Run simulations of yeast sequences

1.1.1.2. simulations of human genome

1.1.1.3. other genome simulations in yeast/human

1.2. Overstretching/Unzipping Construct

1.2.1. Overstretching

1.2.1.1. In H2O

1.2.1.2. In D2O

1.2.2. Unzipping

1.2.2.1. May not be possible

2. D2O Experiments

2.1. Ovalbumin Aggregation

2.2. Kinesin Aggregation

2.3. D2O/DDW FTIR and Millipore studies on D-exchange

2.4. Organism effects

2.4.1. Tobacco Seeds

2.4.1.1. Crumley repeat

2.4.1.2. growth analysis

2.4.2. Arabidopsis

2.4.2.1. attempted adaptation

2.4.3. Yeast

2.4.3.1. Adaptation

2.4.3.2. Growth

2.4.4. E. coli

2.4.4.1. E. coli adaptation

3. ONS

3.1. Everything I've learned about ONS.

3.1.1. Done